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---name: nicheformer-spatial-agent description: Foundation model-powered spatial transcriptomics analysis leveraging 53M+ spatially resolved cells for cellular architecture modeling and tissue niche discovery. license: MIT metadata: author: AI Group version: "1.0.0" created: "2026-01-20" compatib...
---name: prs-net-deep-learning-agent description: Geometric deep learning-based polygenic risk score prediction using PRS-Net for modeling gene interactions, enhanced disease prediction, and cross-ancestry portability. license: MIT metadata: author: AI Group version: "1.0.0" created: "2026-01-20"...
End-to-end RNA-seq workflow from FASTQ files to differential expression results. Covers QC, quantification (Salmon or STAR+featureCounts), and DESeq2 analysis with visualization. Use when running RNA-seq from FASTQ to DE results.
AI-powered analysis of T-cell exhaustion states, epigenetic scarring, stem-like T-cell populations, and checkpoint blockade response prediction in cancer immunotherapy.
AI-powered analysis of cellular senescence for aging research, cancer therapy response, and senolytic drug development.
Write a structured clinical case summary or case presentation. Use when asked to write a clinical case summary, case presentation, patient case report, or clinical handover. Produces a structured summary using SBAR or SOAP format. For educational and documentation purposes only — not a substitute...
# Protocol Writing — Reproducible Lab Protocols & SOPs
Comprehensive health management system integrating 10 best-selling health books' consensus principles. Use when users discuss nutrition, supplements, fitness, diet, anti-aging, anti-inflammation, longevity, or request diet tracking/analysis. Supports (1) Daily diet recording with 3-dimension scor...
Structures 5As smoking cessation intervention with pharmacotherapy selection and motivational interviewing. Use when counseling on tobacco use, prescribing cessation aids, or documenting quit attempts.
Body condition score (1-9 scale), muscle condition score (MCS), RER/MER calculations (RER = 70 × BW^0.75), species-specific requirements (obligate carnivore cats, taurine, arginine), diet-related diseases, renal diet, hepatic diet formulations.
Structures dental treatment planning with phasing, cost estimation, and alternative options presentation. Use when creating treatment plans, phasing dental work, or presenting treatment options.
Develops rehabilitation treatment plans with goals, interventions, and measurable outcome milestones. Use when creating rehab plans, setting therapy goals, or planning intervention progressions.
Analyze contraction JSON and baby log JSON to assess mum's labour/contraction situation and baby's feeding and diaper status. Use when the user provides (or references) contractions_*.json and babyLogs_*.json files and wants to know if mum is safe and baby is healthy, or asks for a summary of con...
Structures psychiatric treatment plans with diagnoses, goals, interventions, and measurable outcomes. Use when creating psychiatric treatment plans, setting therapeutic goals, or documenting treatment modalities.
Act as a medical tutor to answer surgery questions and rationalize multiple-choice options based strictly on Schwartz Principles of Surgery 11e, requiring explicit citations.
Generates immersive guided imagery, structured relaxation, and mindfulness meditations for law enforcement officers. Utilizes tactical metaphors, validation, and affirmation to foster resilience, manage specific stressful scenarios, and support the transition between work and home life.
Client education, meal planning communication, behavior change counseling, and motivational strategies
DSM-5 diagnostic criteria, evidence-based therapy modalities, treatment planning, and progress measurement
Suicide risk assessment using the Columbia Protocol (C-SSRS) and SAFE-T framework — auto-prompts when warning indicators appear
Design infection prevention programs. TRIGGERS - Use when user needs help with infection-prevention-plan related tasks.
Design fall prevention programs. TRIGGERS - Use when user needs help with fall-prevention-healthcare related tasks.
Patient communication about oral health using motivational interviewing, age-appropriate education, and culturally sensitive messaging
Nursing assessment, NANDA-I taxonomy, NIC/NOC classification, medication administration documentation, and vital signs interpretation
Clinical dental hygiene expertise including periodontal assessment, AAP classification, CDT coding, and dental pharmacology
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