Coalescent Species-Tree Estimation -- A Species Tree Is Not a Gene Tree, and Concatenation Is Inconsistent in the Anomal
Estimate species trees using coalescent methods including ASTRAL-III, wASTRAL, ASTRAL-Pro, SVDQuartets, and BPP. Use when multi-locus data shows gene tree discordance from incomplete lineage sorting, when in the anomaly zone where concatenation is misleading, or when computing concordance factors...
