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End-to-end bulk RNA-seq orchestrator — takes raw FASTQ reads through QC and trimming (FastQC, fastp/Trim Galore), alignment and quantification (STAR, Salmon, featureCounts), assembles a gene-level counts matrix, then hands off to differential expression (pydeseq2), pathway/GSEA enrichment (pathwa...
End-to-end RNA-seq workflow from FASTQ files to differential expression results. Covers QC, quantification (Salmon or STAR+featureCounts), and DESeq2 analysis with visualization. Use when running RNA-seq from FASTQ to DE results.
Agent skill for Data Scientist, Researcher, published by FridrichMethod. Project details and file access are provided by the publisher.
Agent skill for Researcher, Data Scientist, Clinical Research, published by majiayu000. Project details and file access are provided by the publisher.
Agent skill for Researcher, Data Scientist, published by majiayu000. Project details and file access are provided by the publisher.
Agent skill for Researcher, Data Scientist, published by majiayu000. Project details and file access are provided by the publisher.
Agent skill for Researcher, Data Scientist, published by majiayu000. Project details and file access are provided by the publisher.
Agent skill for Researcher, Data Scientist, published by BioTender-max. Project details and file access are provided by the publisher.
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