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Reusable instructions for compatible AI agents.
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GRN inference from expression via GRNBoost2 (gradient boosting) or GENIE3 (Random Forest). Load matrix, filter by TFs, infer TF-target-importance links, save network. Dask-parallelized to single-cell scale. Core SCENIC component.
Computational methods for humanities research including text mining and netwo...
Social network analysis methods, metrics, and visualization tools
This tool automates compliance checks for trust products, ensuring investor qualifications and adherence to investment regulations.
Citation graph exploration for discovering related work through visual graph traversal
Build and visualize a citation network from a source/target CSV to identify key papers, communities, and emerging hotspots; use when you have citation pairs and need fast literature review or trend analysis.
Analyze network structures, identify communities, measure centrality, and visualize relationships for social networks and organizational structures
Social network and graph analysis via NetworkX. Use when: graph analysis, community detection, centrality measures, network visualization, knowledge graphs, bipartite networks, graph I/O. NOT for: large-scale graph processing (>1M nodes), GPU graph analytics (use cuGraph).
Comprehensive geospatial science skill covering remote sensing, GIS, spatial analysis, machine learning for earth observation, and 30+ scientific domains. Supports satellite imagery processing (Sentinel, Landsat, MODIS, SAR, hyperspectral), vector and raster data operations, spatial statistics, p...
Network optimization skill for transportation, assignment, and flow problems on graph structures.
Design complete pump systems including piping, controls, and parallel/series configurations
The Diamond Model of Intrusion Analysis provides a structured framework
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